RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g47710.1 View Network Show in Genome Browser |
| Other Names | Os07g0674200 |
| Description | 60S ribosomal protein L22-2, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 28500915-28502626 Nucleotide Length: 393 |
| Protein-coding | LOC_Os07g47710 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g21940 LOC_Os01g61814 LOC_Os05g11710 LOC_Os02g14059 LOC_Os01g59990 LOC_Os03g60400 LOC_Os01g10820 LOC_Os01g54870 LOC_Os06g35730 LOC_Os02g02130 LOC_Os03g58430 More.. |
| Downstream Genes | LOC_Os10g27190 LOC_Os09g24690 LOC_Os08g06040 LOC_Os08g33920 LOC_Os08g03450 LOC_Os09g39500 LOC_Os11g41610 LOC_Os08g39500 LOC_Os08g03640 LOC_Os10g32920 LOC_Os12g05430 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g47710.1 |
| Rice Genome Annotation | LOC_Os07g47710.1 |
| Ricechip | LOC_Os07g47710.1 |
| KEGG | osa:4344261 dosa:Os07t0674200-01 |
| Entrez-Gene | 4344261 |