RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g47830.1 View Network Show in Genome Browser |
| Other Names | Os07g0675100 |
| Description | pectinesterase, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 28558620-28562961 Nucleotide Length: 1740 |
| Protein-coding | LOC_Os07g47830 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g42620 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00040 rn00500 rn01100 |
| Metacyc Pathways | PWY-1081 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g47830.1 |
| Rice Genome Annotation | LOC_Os07g47830.1 |
| Ricechip | LOC_Os07g47830.1 |
| KEGG | osa:4344268 dosa:Os07t0675100-01 |
| Entrez-Gene | 4344268 |