RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g47990.1 View Network Show in Genome Browser |
| Other Names | Os07g0676900 |
| Description | peroxidase precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 28660188-28661910 Nucleotide Length: 957 |
| Protein-coding | LOC_Os07g47990 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g43660 LOC_Os01g15830 LOC_Os03g45920 LOC_Os02g44310 LOC_Os02g09930 LOC_Os05g45930 LOC_Os05g04820 LOC_Os01g59150 LOC_Os06g01490 LOC_Os06g03720 LOC_Os03g11420 More.. |
| Downstream Genes | LOC_Os07g48030 LOC_Os12g40900 LOC_Os10g40520 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00680 rn01100 rn01120 rn00360 rn00940 rn01110 |
| Metacyc Pathways | PWY-5461 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g47990.1 |
| Rice Genome Annotation | LOC_Os07g47990.1 |
| Ricechip | LOC_Os07g47990.1 |
| KEGG | osa:4344276 dosa:Os07t0676900-01 |
| Entrez-Gene | 4344276 |