RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g48030.1 View Network Show in Genome Browser |
| Other Names | Os07g0677300 |
| Description | peroxidase precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 28678385-28680073 Nucleotide Length: 945 |
| Protein-coding | LOC_Os07g48030 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g65880 LOC_Os03g04240 LOC_Os07g47990 LOC_Os04g37480 LOC_Os04g57870 |
| Downstream Genes | LOC_Os11g38010 LOC_Os08g39330 LOC_Os11g26190 |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-5461 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g48030.1 |
| Rice Genome Annotation | LOC_Os07g48030.1 |
| Ricechip | LOC_Os07g48030.1 |
| KEGG | osa:4344279 dosa:Os07t0677300-01 |
| Entrez-Gene | 4344279 |