RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g48160.1 View Network Show in Genome Browser |
| Other Names | Os07g0679300 |
| Description | alpha-galactosidase precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 28764423-28769259 Nucleotide Length: 1278 |
| Protein-coding | LOC_Os07g48160 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g07600 LOC_Os01g68730 LOC_Os06g14400 LOC_Os05g04490 LOC_Os05g51780 LOC_Os04g33520 LOC_Os02g38050 |
| Downstream Genes | LOC_Os08g40830 LOC_Os12g03470 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00052 rn00561 rn00603 rn00600 |
| Metacyc Pathways | PWY0-1301 PWY-6527 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g48160.1 |
| Rice Genome Annotation | LOC_Os07g48160.1 |
| Ricechip | LOC_Os07g48160.1 |
| KEGG | osa:4344290 dosa:Os07t0679300-01 |
| Entrez-Gene | 4344290 |