RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g48280.1 View Network Show in Genome Browser |
| Other Names | Os07g0680600 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 28848822-28852330 Nucleotide Length: 1929 |
| Protein-coding | LOC_Os07g48280 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g50420 LOC_Os03g05750 LOC_Os05g31620 LOC_Os01g64360 LOC_Os03g01740 LOC_Os01g38980 LOC_Os02g45780 LOC_Os01g28790 LOC_Os03g55540 LOC_Os07g34520 LOC_Os04g45730 More.. |
| Downstream Genes | LOC_Os09g28440 LOC_Os09g35010 LOC_Os09g37080 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2118f osa-miR2118j osa-miR2118m |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g48280.1 |
| Rice Genome Annotation | LOC_Os07g48280.1 |
| Ricechip | LOC_Os07g48280.1 |
| KEGG | osa:4344298 dosa:Os07t0680600-01 |
| Entrez-Gene | 4344298 |