RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g48370.1 View Network Show in Genome Browser |
| Other Names | Os07g0681700 |
| Description | glycosyl transferase, family 8, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 28908953-28914097 Nucleotide Length: 1878 |
| Protein-coding | LOC_Os07g48370 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g53520 LOC_Os07g38590 LOC_Os03g14250 LOC_Os05g02820 LOC_Os03g61620 LOC_Os05g44070 LOC_Os03g14610 LOC_Os06g36050 LOC_Os05g01810 LOC_Os03g15630 LOC_Os02g52280 More.. |
| Downstream Genes | LOC_Os11g08090 LOC_Os08g13350 LOC_Os10g36060 LOC_Os11g26190 LOC_Os11g30360 LOC_Os09g32968 LOC_Os12g38360 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR818a osa-miR818b osa-miR818c osa-miR818d osa-miR818e osa-miR5788 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00500 rn00520 rn01110 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g48370.1 |
| Rice Genome Annotation | LOC_Os07g48370.1 |
| Ricechip | LOC_Os07g48370.1 |
| KEGG | osa:4344307 dosa:Os07t0681700-01 |
| Entrez-Gene | 4344307 |