RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g48430.4 View Network Show in Genome Browser |
| Other Names | Os07g0682800 |
| Description | nucleoside-triphosphatase, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 28963027-28965085 Nucleotide Length: 1125 |
| Protein-coding | LOC_Os07g48430 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009856 | pollination | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g55960 LOC_Os03g40270 LOC_Os07g40580 LOC_Os02g55440 LOC_Os06g40120 LOC_Os03g61200 LOC_Os07g31370 LOC_Os02g58510 LOC_Os02g08180 LOC_Os03g55150 LOC_Os06g44374 More.. |
| Downstream Genes | LOC_Os11g07280 LOC_Os09g02700 LOC_Os11g24560 LOC_Os12g03090 LOC_Os11g03400 LOC_Os09g32976 LOC_Os08g23710 LOC_Os12g32240 LOC_Os08g22354 LOC_Os09g38620 LOC_Os08g14570 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5819 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g48430.4 |
| Rice Genome Annotation | LOC_Os07g48430.4 |
| Ricechip | LOC_Os07g48430.4 |
| KEGG | osa:4344315 dosa:Os07t0682800-01 |
| Entrez-Gene | 4344315 |