RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g48640.1 View Network Show in Genome Browser |
| Other Names | Os07g0685800 |
| Description | short-chain dehydrogenase/reductase, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 29121756-29124961 Nucleotide Length: 1122 |
| Protein-coding | LOC_Os07g48640 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g37420 LOC_Os04g52400 LOC_Os03g62590 LOC_Os02g47350 LOC_Os02g38440 LOC_Os01g05840 LOC_Os06g10560 LOC_Os02g56310 LOC_Os02g41580 |
| Downstream Genes | LOC_Os11g24484 LOC_Os10g35370 LOC_Os08g37130 |
| Reference | |
|---|---|
| PubMed | 19211695 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g48640.1 |
| Rice Genome Annotation | LOC_Os07g48640.1 |
| Ricechip | LOC_Os07g48640.1 |
| KEGG | osa:4344332 dosa:Os07t0685800-01 |
| Entrez-Gene | 4344332 |