RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g48790.1 View Network Show in Genome Browser |
| Other Names | Os07g0687300 |
| Description | SNF1-related protein kinase regulatory subunit beta-1, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 29201996-29204556 Nucleotide Length: 951 |
| Protein-coding | LOC_Os07g48790 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0007154 | cell communication | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009991 | response to extracellular stimulus | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g45420 LOC_Os03g63940 LOC_Os03g17980 LOC_Os04g32880 LOC_Os02g02720 LOC_Os03g20340 LOC_Os03g50330 LOC_Os03g49150 LOC_Os02g38300 LOC_Os03g51150 LOC_Os05g41220 More.. |
| Downstream Genes | LOC_Os08g37800 LOC_Os08g17600 LOC_Os09g09480 LOC_Os09g12570 LOC_Os12g01390 LOC_Os11g01380 LOC_Os11g42160 LOC_Os09g15790 LOC_Os12g41220 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g48790.1 |
| Rice Genome Annotation | LOC_Os07g48790.1 |
| Ricechip | LOC_Os07g48790.1 |
| KEGG | osa:4344345 dosa:Os07t0687300-01 |
| Entrez-Gene | 4344345 |