RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g49000.1 View Network Show in Genome Browser |
| Other Names | Os07g0689800 |
| Description | DNAJ heat shock N-terminal domain-containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 29338447-29341163 Nucleotide Length: 1812 |
| Protein-coding | LOC_Os07g49000 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g06710 LOC_Os04g59394 LOC_Os03g22140 LOC_Os06g41750 LOC_Os03g15740 LOC_Os02g51730 LOC_Os01g68680 LOC_Os07g27180 LOC_Os01g42960 LOC_Os06g11320 LOC_Os02g43020 More.. |
| Downstream Genes | LOC_Os12g41190 LOC_Os10g32300 LOC_Os09g36740 LOC_Os08g44510 LOC_Os11g05090 LOC_Os08g41390 LOC_Os10g36250 LOC_Os12g05090 LOC_Os08g39080 LOC_Os10g32348 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR168b |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g49000.1 |
| Rice Genome Annotation | LOC_Os07g49000.1 |
| Ricechip | LOC_Os07g49000.1 |
| KEGG | osa:4344362 dosa:Os07t0689800-01 |
| Entrez-Gene | 4344362 |