RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g49010.1 View Network Show in Genome Browser |
| Other Names | Os07g0690100,Os07g0689900,Os07g0689950 |
| Description | TOPBP1B - Similar to DNA replication protein TOPBP1 from, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 29342988-29350836 Nucleotide Length: 4008 |
| Protein-coding | LOC_Os07g49010 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g05190 LOC_Os01g71256 LOC_Os04g51700 LOC_Os03g49210 LOC_Os02g32860 LOC_Os06g47580 LOC_Os07g23110 LOC_Os05g48030 LOC_Os03g57450 LOC_Os01g68950 LOC_Os01g68940 More.. |
| Downstream Genes | LOC_Os09g39420 LOC_Os11g08660 LOC_Os11g31890 LOC_Os11g36390 LOC_Os09g26870 LOC_Os08g01680 LOC_Os12g43100 LOC_Os12g30150 LOC_Os12g06620 LOC_Os11g07040 LOC_Os12g07230 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g49010.1 |
| Rice Genome Annotation | LOC_Os07g49010.1 |
| Ricechip | LOC_Os07g49010.1 |
| KEGG | osa:4344363 |