RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g49040.1 View Network Show in Genome Browser |
| Other Names | Os07g0690400 |
| Description | protein phosphotase protein, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 29363652-29370482 Nucleotide Length: 1296 |
| Protein-coding | LOC_Os07g49040 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g22810 LOC_Os01g40700 LOC_Os02g56110 LOC_Os01g56330 LOC_Os05g04340 LOC_Os04g41100 LOC_Os01g19150 LOC_Os01g51200 LOC_Os01g38950 LOC_Os04g06210 LOC_Os06g35530 More.. |
| Downstream Genes | LOC_Os10g37520 LOC_Os08g28730 LOC_Os09g21780 LOC_Os09g16950 LOC_Os12g38860 LOC_Os11g32240 LOC_Os10g03480 LOC_Os11g39450 LOC_Os10g37740 LOC_Os11g17380 LOC_Os11g36180 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g49040.1 |
| Rice Genome Annotation | LOC_Os07g49040.1 |
| Ricechip | LOC_Os07g49040.1 |
| KEGG | osa:4344366 dosa:Os07t0690400-01 |
| Entrez-Gene | 4344366 |