RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g49110.1 View Network Show in Genome Browser |
| Other Names | Os07g0691200 |
| Description | D-alanine--D-alanine ligase family, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 29392447-29401913 Nucleotide Length: 2841 |
| Protein-coding | LOC_Os07g49110 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g33230 LOC_Os01g11260 LOC_Os03g12320 LOC_Os05g37160 LOC_Os02g01340 LOC_Os03g44420 |
| Pathways | |
|---|---|
| Metacyc Pathways | PEPTIDOGLYCANSYN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g49110.1 |
| Rice Genome Annotation | LOC_Os07g49110.1 |
| Ricechip | LOC_Os07g49110.1 |
| KEGG | osa:4344370 dosa:Os07t0691200-01 |
| Entrez-Gene | 4344370 |