RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g49230.1 View Network Show in Genome Browser |
| Other Names | Os07g0692900 |
| Description | ubiquitin-activating enzyme, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 29478758-29483659 Nucleotide Length: 3177 |
| Protein-coding | LOC_Os07g49230 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g39780 LOC_Os01g42850 LOC_Os03g06200 LOC_Os03g60550 LOC_Os07g22950 LOC_Os03g55620 LOC_Os06g37440 LOC_Os02g12794 LOC_Os02g12800 LOC_Os05g39850 LOC_Os03g29470 More.. |
| Downstream Genes | LOC_Os09g27420 LOC_Os08g44770 LOC_Os10g11140 LOC_Os10g41410 LOC_Os08g09940 LOC_Os11g48080 LOC_Os09g30412 LOC_Os09g30418 LOC_Os08g39140 LOC_Os11g20384 LOC_Os11g43900 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5794 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g49230.1 |
| Rice Genome Annotation | LOC_Os07g49230.1 |
| Ricechip | LOC_Os07g49230.1 |
| KEGG | osa:4344380 dosa:Os07t0692900-01 |
| Entrez-Gene | 4344380 |