RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g49310.1 View Network Show in Genome Browser |
| Other Names | Os07g0693800 |
| Description | omega-3 fatty acid desaturase, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 29531227-29534135 Nucleotide Length: 1242 |
| Protein-coding | LOC_Os07g49310 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g18070 LOC_Os02g57290 LOC_Os03g14040 LOC_Os02g35630 LOC_Os07g23430 LOC_Os02g48560 LOC_Os07g23410 LOC_Os07g14070 LOC_Os07g14030 LOC_Os07g03730 LOC_Os02g27300 More.. |
| Downstream Genes | LOC_Os12g01370 LOC_Os11g01340 LOC_Os09g16920 LOC_Os08g34220 LOC_Os08g03520 |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-782 PWY-762 |
| Reference | |
|---|---|
| PubMed | 22378946 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g49310.1 |
| Rice Genome Annotation | LOC_Os07g49310.1 |
| Ricechip | LOC_Os07g49310.1 |
| KEGG | osa:4344389 dosa:Os07t0693800-01 |
| Entrez-Gene | 4344389 |