RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g49320.1 View Network Show in Genome Browser |
| Other Names | Os07g0693900 |
| Description | HEAT repeat family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 29534469-29545698 Nucleotide Length: 3738 |
| Protein-coding | LOC_Os07g49320 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0040029 | regulation of gene expression, epigenetic | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005654 | nucleoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g16110 LOC_Os03g02970 LOC_Os03g42840 LOC_Os06g03780 |
| Downstream Genes | LOC_Os10g19860 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR167a-5p osa-miR167b osa-miR167c-5p osa-miR167d-5p osa-miR167e-5p osa-miR167f osa-miR167g osa-miR167h-5p osa-miR167i-5p osa-miR167j |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g49320.1 |
| Rice Genome Annotation | LOC_Os07g49320.1 |
| Ricechip | LOC_Os07g49320.1 |
| KEGG | osa:4344390 dosa:Os07t0693900-01 |
| Entrez-Gene | 4344390 |