RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g49400.4 View Network Show in Genome Browser |
| Other Names | Os07g0694700 |
| Description | OsAPx2 - Cytosolic Ascorbate Peroxidase encoding gene 4,5,6,8, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 29583717-29586352 Nucleotide Length: 525 |
| Protein-coding | LOC_Os07g49400 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g46750 LOC_Os04g38600 LOC_Os02g09150 LOC_Os01g54870 LOC_Os03g55720 LOC_Os06g02510 LOC_Os02g49870 LOC_Os07g37030 LOC_Os03g56670 LOC_Os05g19370 LOC_Os03g40180 More.. |
| Downstream Genes | LOC_Os08g27850 LOC_Os08g03640 LOC_Os11g04070 LOC_Os12g03880 LOC_Os11g47760 LOC_Os11g11390 LOC_Os11g26850 LOC_Os11g43900 LOC_Os12g37650 LOC_Os10g41410 LOC_Os11g42160 More.. |
| Reference | |
|---|---|
| PubMed | 22848448 14644501 22196946 15685422 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g49400.4 |
| Rice Genome Annotation | LOC_Os07g49400.4 |
| Ricechip | LOC_Os07g49400.4 |
| KEGG | osa:4344397 dosa:Os07t0694700-01 |
| Entrez-Gene | 4344397 |