RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g01380.1 View Network Show in Genome Browser |
| Other Names | Os08g0104600 |
| Description | 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 241679-242634 Nucleotide Length: 420 |
| Protein-coding | LOC_Os08g01380 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0015979 | photosynthesis | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g38600 LOC_Os03g03720 LOC_Os01g31690 LOC_Os05g48630 LOC_Os03g56670 LOC_Os07g04840 LOC_Os03g22370 LOC_Os07g25430 LOC_Os06g01210 LOC_Os07g36080 LOC_Os06g15400 More.. |
| Downstream Genes | LOC_Os08g02630 LOC_Os08g10020 LOC_Os09g30340 LOC_Os11g47970 LOC_Os12g19470 LOC_Os12g19381 LOC_Os12g07210 LOC_Os11g07020 LOC_Os11g13890 LOC_Os08g33820 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g01380.1 |
| Rice Genome Annotation | LOC_Os08g01380.1 |
| Ricechip | LOC_Os08g01380.1 |
| KEGG | osa:4344439 dosa:Os08t0104600-02 |
| Entrez-Gene | 4344439 |