RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g01610.3 View Network Show in Genome Browser |
| Other Names | Os08g0107400 |
| Description | DUF250 domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 361152-366564 Nucleotide Length: 870 |
| Protein-coding | LOC_Os08g01610 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g28750 LOC_Os01g19840 LOC_Os03g30830 LOC_Os01g55820 LOC_Os03g01230 LOC_Os05g38520 LOC_Os01g62350 LOC_Os04g32950 LOC_Os07g13270 LOC_Os06g04500 LOC_Os01g66270 More.. |
| Downstream Genes | LOC_Os12g37370 LOC_Os09g27370 LOC_Os11g47710 LOC_Os11g41130 LOC_Os08g05890 LOC_Os11g41160 LOC_Os08g40830 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g01610.3 |
| Rice Genome Annotation | LOC_Os08g01610.3 |
| Ricechip | LOC_Os08g01610.3 |
| KEGG | osa:4344457 dosa:Os08t0107400-01 |
| Entrez-Gene | 4344457 |