RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g01660.2 View Network Show in Genome Browser |
| Other Names | Os08g0107900 |
| Description | mago nashi, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 384088-384836 Nucleotide Length: 492 |
| Protein-coding | LOC_Os08g01660 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009856 | pollination | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0009605 | response to external stimulus | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0005654 | nucleoplasm | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g04850 LOC_Os03g17010 LOC_Os03g18720 LOC_Os02g02510 LOC_Os04g39444 LOC_Os03g59710 LOC_Os02g37430 LOC_Os02g12570 LOC_Os07g07220 LOC_Os02g03440 LOC_Os03g60110 More.. |
| Downstream Genes | LOC_Os11g43620 LOC_Os08g05530 LOC_Os10g06130 LOC_Os10g34520 LOC_Os12g44390 LOC_Os08g34480 LOC_Os08g37960 LOC_Os10g31900 LOC_Os11g14430 LOC_Os10g35550 LOC_Os09g02284 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g01660.2 |
| Rice Genome Annotation | LOC_Os08g01660.2 |
| Ricechip | LOC_Os08g01660.2 |
| KEGG | osa:4344462 dosa:Os08t0107900-01 |
| Entrez-Gene | 4344462 |