RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g01680.1 View Network Show in Genome Browser |
| Other Names | Os08g0108200 |
| Description | WD domain, G-beta repeat domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 395228-400898 Nucleotide Length: 1518 |
| Protein-coding | LOC_Os08g01680 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g03060 LOC_Os03g43890 LOC_Os05g48030 LOC_Os03g02680 LOC_Os01g67100 LOC_Os03g01850 LOC_Os06g06510 LOC_Os06g06460 LOC_Os05g36280 LOC_Os04g34240 LOC_Os01g64640 More.. |
| Downstream Genes | LOC_Os08g01690 LOC_Os11g05730 LOC_Os12g42150 LOC_Os12g07450 LOC_Os11g07480 LOC_Os11g42420 LOC_Os10g39410 LOC_Os09g38020 LOC_Os09g26340 LOC_Os09g39420 LOC_Os08g18150 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g01680.1 |
| Rice Genome Annotation | LOC_Os08g01680.1 |
| Ricechip | LOC_Os08g01680.1 |
| KEGG | osa:4344464 dosa:Os08t0108200-01 |
| Entrez-Gene | 4344464 |