RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g01750.2 View Network Show in Genome Browser |
| Other Names | Os08g0109100 |
| Description | SAC domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 451120-458227 Nucleotide Length: 2670 |
| Protein-coding | LOC_Os08g01750 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0016049 | cell growth | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g12300 LOC_Os02g34884 LOC_Os03g28140 LOC_Os01g40050 LOC_Os01g08780 LOC_Os03g18080 LOC_Os02g44510 LOC_Os01g51890 LOC_Os06g14750 LOC_Os04g01740 LOC_Os03g62680 More.. |
| Downstream Genes | LOC_Os11g20384 LOC_Os08g34950 LOC_Os12g04160 LOC_Os11g04370 LOC_Os09g30418 LOC_Os09g30412 LOC_Os08g39140 LOC_Os08g33200 LOC_Os09g23740 LOC_Os08g36490 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2929 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g01750.2 |
| Rice Genome Annotation | LOC_Os08g01750.2 |
| Ricechip | LOC_Os08g01750.2 |
| KEGG | osa:4344468 dosa:Os08t0109100-01 |
| Entrez-Gene | 4344468 |