RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g01840.1 View Network Show in Genome Browser |
| Other Names | Os08g0109900 |
| Description | nucleic acid binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 513747-518277 Nucleotide Length: 894 |
| Protein-coding | LOC_Os08g01840 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g04480 LOC_Os02g05310 LOC_Os02g32350 LOC_Os02g01740 LOC_Os02g58090 LOC_Os03g53220 LOC_Os07g07220 LOC_Os01g08430 LOC_Os02g05410 LOC_Os06g21560 LOC_Os02g27790 More.. |
| Downstream Genes | LOC_Os09g24220 LOC_Os12g38110 LOC_Os12g07010 LOC_Os11g06750 LOC_Os11g19250 LOC_Os09g34910 LOC_Os10g31900 LOC_Os09g12800 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g01840.1 |
| Rice Genome Annotation | LOC_Os08g01840.1 |
| Ricechip | LOC_Os08g01840.1 |
| KEGG | osa:4344474 dosa:Os08t0109900-01 |
| Entrez-Gene | 4344474 |