RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g02060.1 View Network Show in Genome Browser |
| Other Names | Os08g0112600 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 671260-674727 Nucleotide Length: 555 |
| Protein-coding | LOC_Os08g02060 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g43070 LOC_Os05g47850 LOC_Os01g59510 LOC_Os02g51470 LOC_Os06g04150 LOC_Os03g17470 LOC_Os02g03720 LOC_Os01g69950 LOC_Os05g35540 LOC_Os03g61030 LOC_Os03g20640 More.. |
| Downstream Genes | LOC_Os10g35280 LOC_Os09g30100 LOC_Os09g36130 LOC_Os09g10750 LOC_Os10g42720 LOC_Os11g32320 LOC_Os09g32030 LOC_Os09g34140 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g02060.1 |
| Rice Genome Annotation | LOC_Os08g02060.1 |
| Ricechip | LOC_Os08g02060.1 |
| KEGG | osa:4344492 dosa:Os08t0112600-01 |
| Entrez-Gene | 4344492 |