RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g02130.2 View Network Show in Genome Browser |
| Other Names | Os08g0113200 |
| Description | RNA recognition motif containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 704557-713850 Nucleotide Length: 2517 |
| Protein-coding | LOC_Os08g02130 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g72890 LOC_Os02g34570 LOC_Os04g51900 LOC_Os03g58640 LOC_Os07g07220 LOC_Os05g01540 LOC_Os01g51154 LOC_Os02g44810 LOC_Os05g02080 LOC_Os04g45040 LOC_Os05g44792 More.. |
| Downstream Genes | LOC_Os10g35550 LOC_Os09g07500 LOC_Os10g29514 LOC_Os08g10450 LOC_Os11g08330 LOC_Os11g41180 LOC_Os11g38310 LOC_Os11g44840 LOC_Os08g25010 LOC_Os12g39070 LOC_Os10g25130 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2925 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g02130.2 |
| Rice Genome Annotation | LOC_Os08g02130.2 |
| Ricechip | LOC_Os08g02130.2 |
| KEGG | osa:4344498 dosa:Os08t0113200-01 |
| Entrez-Gene | 4344498 |