RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g02140.3 View Network Show in Genome Browser |
| Other Names | Os08g0113300 |
| Description | STIP1 homology and U box-containing protein 1, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 715589-720171 Nucleotide Length: 507 |
| Protein-coding | LOC_Os08g02140 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g31400 LOC_Os05g48810 LOC_Os01g13760 LOC_Os03g16920 LOC_Os04g01740 LOC_Os06g51029 LOC_Os05g06770 LOC_Os03g13170 LOC_Os01g22490 LOC_Os03g13970 LOC_Os05g38530 More.. |
| Downstream Genes | LOC_Os09g30412 LOC_Os09g30418 LOC_Os08g39140 LOC_Os10g23090 LOC_Os10g43050 LOC_Os09g39500 LOC_Os09g07510 LOC_Os11g47760 LOC_Os10g32880 LOC_Os11g10100 LOC_Os10g28340 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g02140.3 |
| Rice Genome Annotation | LOC_Os08g02140.3 |
| Ricechip | LOC_Os08g02140.3 |
| KEGG | osa:4344499 dosa:Os08t0113300-01 |
| Entrez-Gene | 4344499 |