RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g02340.1 View Network Show in Genome Browser |
| Other Names | Os08g0116500 |
| Description | 60S acidic ribosomal protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 904112-905710 Nucleotide Length: 333 |
| Protein-coding | LOC_Os08g02340 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g48660 LOC_Os05g37330 LOC_Os07g10720 LOC_Os02g14059 LOC_Os02g27760 LOC_Os02g47140 LOC_Os07g07709 LOC_Os03g58050 LOC_Os03g56241 LOC_Os03g58430 LOC_Os03g04590 More.. |
| Downstream Genes | LOC_Os11g03400 LOC_Os12g03090 LOC_Os08g03640 LOC_Os11g04070 LOC_Os12g03880 LOC_Os11g41610 LOC_Os08g02410 LOC_Os08g39500 LOC_Os10g27174 LOC_Os10g32920 LOC_Os08g02400 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g02340.1 |
| Rice Genome Annotation | LOC_Os08g02340.1 |
| Ricechip | LOC_Os08g02340.1 |
| KEGG | osa:4344516 dosa:Os08t0116500-01 |
| Entrez-Gene | 4344516 |