RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g02360.1 View Network Show in Genome Browser |
| Other Names | Os08g0116800 |
| Description | exosome complex exonuclease, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 936009-940477 Nucleotide Length: 789 |
| Protein-coding | LOC_Os08g02360 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0004518 | nuclease activity | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g34570 LOC_Os02g55940 LOC_Os06g07896 LOC_Os07g07310 LOC_Os04g43922 LOC_Os04g58640 LOC_Os02g32460 LOC_Os01g66730 LOC_Os01g47256 LOC_Os06g04610 LOC_Os05g16660 More.. |
| Downstream Genes | LOC_Os12g21500 LOC_Os11g20689 LOC_Os12g34550 LOC_Os08g21660 LOC_Os09g32800 LOC_Os08g08040 LOC_Os09g14680 LOC_Os09g34010 LOC_Os11g07500 LOC_Os08g41730 LOC_Os09g36710 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g02360.1 |
| Rice Genome Annotation | LOC_Os08g02360.1 |
| Ricechip | LOC_Os08g02360.1 |
| KEGG | osa:4344519 dosa:Os08t0116800-01 |
| Entrez-Gene | 4344519 |