RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g02390.1 View Network Show in Genome Browser |
| Other Names | Os08g0117100 |
| Description | RNA recognition motif containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 953683-956164 Nucleotide Length: 960 |
| Protein-coding | LOC_Os08g02390 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g11230 LOC_Os03g17580 LOC_Os02g49820 LOC_Os04g38750 LOC_Os01g53150 LOC_Os06g20010 LOC_Os02g04460 LOC_Os07g05000 LOC_Os03g48040 LOC_Os05g23740 LOC_Os05g06750 More.. |
| Downstream Genes | LOC_Os09g33870 LOC_Os09g39180 LOC_Os08g45240 LOC_Os09g37720 LOC_Os08g41990 LOC_Os08g29370 LOC_Os12g38430 LOC_Os12g34860 LOC_Os09g10760 LOC_Os10g02630 LOC_Os09g29980 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2926 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g02390.1 |
| Rice Genome Annotation | LOC_Os08g02390.1 |
| Ricechip | LOC_Os08g02390.1 |
| KEGG | osa:4344522 dosa:Os08t0117100-01 |
| Entrez-Gene | 4344522 |