RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g02400.1 View Network Show in Genome Browser |
| Other Names | Os08g0117200 |
| Description | 40S ribosomal protein S13, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 956309-958681 Nucleotide Length: 456 |
| Protein-coding | LOC_Os08g02400 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0007049 | cell cycle | Biological Process | IEA | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g10720 LOC_Os02g27760 LOC_Os04g42380 LOC_Os05g48310 LOC_Os05g48220 LOC_Os04g52361 LOC_Os02g14059 LOC_Os02g40880 LOC_Os06g35730 LOC_Os05g11710 LOC_Os01g10820 More.. |
| Downstream Genes | LOC_Os08g10608 LOC_Os12g03090 LOC_Os11g03400 LOC_Os08g03450 LOC_Os09g31180 LOC_Os10g27174 LOC_Os08g44480 LOC_Os09g39540 LOC_Os11g05562 LOC_Os08g03640 LOC_Os11g38959 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g02400.1 |
| Rice Genome Annotation | LOC_Os08g02400.1 |
| Ricechip | LOC_Os08g02400.1 |
| KEGG | osa:4344523 dosa:Os08t0117200-00 |
| Entrez-Gene | 4344523 |