RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g02630.1 View Network Show in Genome Browser |
| Other Names | Os08g0119800 |
| Description | photosystem II core complex proteins psbY, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 1089735-1091023 Nucleotide Length: 618 |
| Protein-coding | LOC_Os08g02630 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0015979 | photosynthesis | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g33830 LOC_Os05g48630 LOC_Os01g31690 LOC_Os03g56670 LOC_Os07g25430 LOC_Os07g37240 LOC_Os03g22370 LOC_Os07g36080 LOC_Os08g01380 LOC_Os06g15400 LOC_Os06g21210 More.. |
| Downstream Genes | LOC_Os09g30340 LOC_Os11g47970 LOC_Os08g33820 LOC_Os12g19470 LOC_Os12g19381 LOC_Os11g07020 LOC_Os11g26850 LOC_Os12g07210 LOC_Os08g35760 LOC_Os12g08770 LOC_Os08g44680 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g02630.1 |
| Rice Genome Annotation | LOC_Os08g02630.1 |
| Ricechip | LOC_Os08g02630.1 |
| KEGG | osa:4344539 dosa:Os08t0119800-01 |
| Entrez-Gene | 4344539 |