RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g02670.1 View Network Show in Genome Browser |
| Other Names | Os08g0120200 |
| Description | ATP binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 1111277-1115786 Nucleotide Length: 2400 |
| Protein-coding | LOC_Os08g02670 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g08380 LOC_Os06g29430 LOC_Os03g20570 LOC_Os02g40010 LOC_Os07g30150 LOC_Os04g42520 LOC_Os06g10200 LOC_Os07g14150 LOC_Os02g53790 LOC_Os03g61810 LOC_Os04g57540 More.. |
| Downstream Genes | LOC_Os09g04210 LOC_Os12g40130 LOC_Os12g39860 LOC_Os12g13380 LOC_Os11g20790 LOC_Os11g39670 LOC_Os12g32986 LOC_Os09g30418 LOC_Os09g30412 LOC_Os08g39140 LOC_Os09g36420 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR167a-5p osa-miR167b osa-miR167c-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g02670.1 |
| Rice Genome Annotation | LOC_Os08g02670.1 |
| Ricechip | LOC_Os08g02670.1 |
| KEGG | osa:4344542 dosa:Os08t0120200-01 |
| Entrez-Gene | 4344542 |