RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g02690.1 View Network Show in Genome Browser |
| Other Names | Os08g0120500 |
| Description | MA3 domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 1121127-1126441 Nucleotide Length: 2151 |
| Protein-coding | LOC_Os08g02690 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g05450 LOC_Os06g14530 LOC_Os06g48750 LOC_Os02g05330 LOC_Os08g02410 LOC_Os01g67134 LOC_Os08g02400 LOC_Os01g11952 LOC_Os07g36940 LOC_Os08g02340 LOC_Os05g25850 More.. |
| Downstream Genes | LOC_Os12g15420 LOC_Os11g05394 LOC_Os09g33520 LOC_Os11g13540 LOC_Os09g31970 LOC_Os08g40180 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g02690.1 |
| Rice Genome Annotation | LOC_Os08g02690.1 |
| Ricechip | LOC_Os08g02690.1 |
| KEGG | osa:4344544 dosa:Os08t0120500-01 |
| Entrez-Gene | 4344544 |