RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
General Information | |
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Locus Name | LOC_Os08g02700.1 View Network Show in Genome Browser |
Other Names | Os08g0120600 |
Description | fructose-bisphospate aldolase isozyme, putative, expressed |
Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 1127882-1129553 Nucleotide Length: 1089 |
Protein-coding | LOC_Os08g02700 |
Gene Ontology Classification | ||||
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GO | Name | Type | Code | |
GO:0008150 | biological_process | Biological Process | IEA | |
GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
GO:0009056 | catabolic process | Biological Process | IEA | |
GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
GO:0006950 | response to stress | Biological Process | IEA | |
GO:0005488 | binding | Molecular Function | IEA | |
GO:0005575 | cellular_component | Cellular Component | IEA | |
GO:0005829 | cytosol | Cellular Component | IEA | |
GO:0016020 | membrane | Cellular Component | IEA | |
GO:0005739 | mitochondrion | Cellular Component | IEA | |
GO:0005886 | plasma membrane | Cellular Component | IEA |
Regulatory Genes ( Show Network In Viewer ) | |
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Upstream Genes | LOC_Os05g44922 LOC_Os02g01510 LOC_Os01g53680 LOC_Os01g62420 LOC_Os06g14510 LOC_Os02g07260 LOC_Os03g56460 LOC_Os01g09570 LOC_Os06g05860 LOC_Os05g10650 LOC_Os01g64660 More.. |
Downstream Genes | LOC_Os08g34050 LOC_Os09g24910 LOC_Os10g26570 LOC_Os10g32550 LOC_Os09g30240 LOC_Os10g30550 LOC_Os12g43630 |
miRNA Regulations | |
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miRNAs | osa-miR531b |
Pathways | |
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KEGG Pathways | rn00710 rn01100 rn01120 rn00680 rn00051 rn00010 rn00030 rn01110 |
Metacyc Pathways | ANAEROFRUCAT-PWY P185-PWY GLUCONEO-PWY PWY-1042 CALVIN-PWY PWY-3801 GLYCOLYSIS |
Database Links | |
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Gramene | LOC_Os08g02700.1 |
Rice Genome Annotation | LOC_Os08g02700.1 |
Ricechip | LOC_Os08g02700.1 |
KEGG | osa:4344545 dosa:Os08t0120600-01 |
Entrez-Gene | 4344545 |