RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g03350.1 View Network Show in Genome Browser |
| Other Names | Os08g0127100 |
| Description | amino acid transporter, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 1561754-1567028 Nucleotide Length: 1344 |
| Protein-coding | LOC_Os08g03350 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g34270 LOC_Os04g43070 LOC_Os02g49800 LOC_Os05g48930 LOC_Os01g38980 LOC_Os01g03820 LOC_Os07g30170 LOC_Os05g13440 LOC_Os02g35470 LOC_Os05g47770 LOC_Os02g40730 More.. |
| Downstream Genes | LOC_Os12g08180 LOC_Os12g04990 LOC_Os11g04980 LOC_Os08g41470 LOC_Os10g02970 LOC_Os10g30540 LOC_Os10g30790 LOC_Os09g22450 LOC_Os10g42960 LOC_Os11g14420 LOC_Os11g27370 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g03350.1 |
| Rice Genome Annotation | LOC_Os08g03350.1 |
| Ricechip | LOC_Os08g03350.1 |
| KEGG | osa:4344567 dosa:Os08t0127100-01 |
| Entrez-Gene | 4344567 |