RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g03520.1 View Network Show in Genome Browser |
| Other Names | Os08g0129200 |
| Description | retrotransposon protein, putative, Ty1-copia subclass, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 1644811-1646004 Nucleotide Length: 594 |
| Protein-coding | LOC_Os08g03520 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| IEA | ||||
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g14780 LOC_Os07g10256 LOC_Os04g58640 LOC_Os02g56130 LOC_Os03g63590 LOC_Os03g13800 LOC_Os02g13990 LOC_Os02g02510 LOC_Os03g22570 LOC_Os06g21470 LOC_Os01g72890 More.. |
| Downstream Genes | LOC_Os10g34520 LOC_Os12g37370 LOC_Os10g31900 LOC_Os09g37720 LOC_Os11g41820 LOC_Os09g39590 LOC_Os10g06130 LOC_Os08g37960 LOC_Os08g34480 LOC_Os08g27070 LOC_Os11g08940 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g03520.1 |
| Rice Genome Annotation | LOC_Os08g03520.1 |
| Ricechip | LOC_Os08g03520.1 |
| KEGG | osa:4344581 dosa:Os08t0129200-02 |
| Entrez-Gene | 4344581 |