RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g03560.1 View Network Show in Genome Browser |
| Other Names | Os08g0129600 |
| Description | chloroplast unusual positioning protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 1653274-1658274 Nucleotide Length: 2397 |
| Protein-coding | LOC_Os08g03560 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g12140 LOC_Os05g38480 LOC_Os01g70560 LOC_Os01g64900 LOC_Os07g46540 LOC_Os03g02290 LOC_Os02g35230 LOC_Os03g45760 LOC_Os06g02530 |
| Downstream Genes | LOC_Os09g38710 LOC_Os11g37100 LOC_Os08g32500 LOC_Os08g44420 LOC_Os08g44410 LOC_Os08g37320 LOC_Os08g40170 LOC_Os12g17530 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g03560.1 |
| Rice Genome Annotation | LOC_Os08g03560.1 |
| Ricechip | LOC_Os08g03560.1 |
| KEGG | osa:4344583 dosa:Os08t0129600-01 |
| Entrez-Gene | 4344583 |