RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g04280.1 View Network Show in Genome Browser |
| Other Names | Os08g0137200 |
| Description | actin, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 2084554-2093718 Nucleotide Length: 1470 |
| Protein-coding | LOC_Os08g04280 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g08170 LOC_Os01g62040 LOC_Os01g51154 LOC_Os01g51300 LOC_Os05g24970 LOC_Os04g58640 LOC_Os01g72890 LOC_Os03g52490 LOC_Os07g45064 LOC_Os02g04480 LOC_Os03g22690 More.. |
| Downstream Genes | LOC_Os09g04810 LOC_Os11g34300 LOC_Os08g09320 LOC_Os08g20570 LOC_Os12g25200 LOC_Os12g07150 LOC_Os09g12710 LOC_Os11g33090 LOC_Os11g34210 LOC_Os11g06900 LOC_Os09g13610 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g04280.1 |
| Rice Genome Annotation | LOC_Os08g04280.1 |
| Ricechip | LOC_Os08g04280.1 |
| KEGG | osa:4344621 dosa:Os08t0137200-01 |
| Entrez-Gene | 4344621 |