RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g04440.2 View Network Show in Genome Browser |
| Other Names | Os08g0139000 |
| Description | RNA recognition motif containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 2173391-2177071 Nucleotide Length: 336 |
| Protein-coding | LOC_Os08g04440 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g52140 LOC_Os05g13630 LOC_Os02g15310 LOC_Os03g03140 LOC_Os06g11620 LOC_Os03g04780 LOC_Os01g36920 LOC_Os01g36890 LOC_Os03g22380 LOC_Os05g30140 LOC_Os05g35274 More.. |
| Downstream Genes | LOC_Os09g29980 LOC_Os11g45590 LOC_Os11g41820 LOC_Os12g38430 LOC_Os08g37700 LOC_Os11g07490 LOC_Os08g38240 LOC_Os12g01010 LOC_Os11g01020 LOC_Os12g04180 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g04440.2 |
| Rice Genome Annotation | LOC_Os08g04440.2 |
| Ricechip | LOC_Os08g04440.2 |
| KEGG | osa:4344631 dosa:Os08t0139000-02 |
| Entrez-Gene | 4344631 |