RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g04460.1 View Network Show in Genome Browser |
| Other Names | Os08g0139200 |
| Description | NADPH-dependent FMN reductase domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 2182687-2184807 Nucleotide Length: 612 |
| Protein-coding | LOC_Os08g04460 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g21970 LOC_Os02g38920 LOC_Os03g56390 LOC_Os01g53250 LOC_Os04g40950 LOC_Os05g48450 LOC_Os06g15990 LOC_Os06g25439 LOC_Os04g55960 LOC_Os02g40830 LOC_Os03g17790 More.. |
| Downstream Genes | LOC_Os09g38620 LOC_Os10g40200 LOC_Os08g14570 LOC_Os11g09280 LOC_Os11g06390 LOC_Os10g36650 LOC_Os10g40590 LOC_Os12g03090 LOC_Os11g03400 LOC_Os11g34750 LOC_Os10g37660 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR168b |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g04460.1 |
| Rice Genome Annotation | LOC_Os08g04460.1 |
| Ricechip | LOC_Os08g04460.1 |
| KEGG | osa:4344633 dosa:Os08t0139200-01 |
| Entrez-Gene | 4344633 |