RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g04770.1 View Network Show in Genome Browser |
| Other Names | Os08g0143300 |
| Description | AMP-binding domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 2382155-2385161 Nucleotide Length: 1776 |
| Protein-coding | LOC_Os08g04770 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g32670 LOC_Os03g59080 LOC_Os01g56990 LOC_Os05g30750 LOC_Os02g13870 LOC_Os03g52980 LOC_Os02g26300 LOC_Os07g12890 LOC_Os07g32890 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00130 rn00360 rn00940 rn01100 rn01110 |
| Metacyc Pathways | PWY1F-FLAVSYN PWY-361 PWY-5754 PWY-6435 PWY-6673 PWY-6320 PWY-1121 PWY-5135 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g04770.1 |
| Rice Genome Annotation | LOC_Os08g04770.1 |
| Ricechip | LOC_Os08g04770.1 |
| KEGG | osa:9269113 dosa:Os08t0143300-00 |
| Entrez-Gene | 9269113 |