RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g05530.1 View Network Show in Genome Browser |
| Other Names | Os08g0151400 |
| Description | LSM domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 2965358-2968015 Nucleotide Length: 336 |
| Protein-coding | LOC_Os08g05530 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g64690 LOC_Os04g39444 LOC_Os02g37430 LOC_Os07g41790 LOC_Os05g24970 LOC_Os02g01250 LOC_Os03g13760 LOC_Os03g29740 LOC_Os05g32310 LOC_Os01g15310 LOC_Os02g30624 More.. |
| Downstream Genes | LOC_Os11g43620 LOC_Os08g08040 LOC_Os10g34380 LOC_Os10g02630 LOC_Os10g35550 LOC_Os12g18880 LOC_Os08g05550 LOC_Os12g44390 LOC_Os08g34480 LOC_Os08g10608 LOC_Os09g32976 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g05530.1 |
| Rice Genome Annotation | LOC_Os08g05530.1 |
| Ricechip | LOC_Os08g05530.1 |
| KEGG | osa:4344666 dosa:Os08t0151400-01 |
| Entrez-Gene | 4344666 |