RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g05620.1 View Network Show in Genome Browser |
| Other Names | Os08g0152400 |
| Description | cytochrome P450, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 3007241-3009195 Nucleotide Length: 1551 |
| Protein-coding | LOC_Os08g05620 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0019825 | oxygen binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g59050 LOC_Os02g57290 LOC_Os03g04640 LOC_Os07g23710 LOC_Os02g07680 LOC_Os01g43760 LOC_Os05g48930 |
| Downstream Genes | LOC_Os10g38110 LOC_Os10g38120 LOC_Os10g38090 LOC_Os10g39930 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5809 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g05620.1 |
| Rice Genome Annotation | LOC_Os08g05620.1 |
| Ricechip | LOC_Os08g05620.1 |
| KEGG | osa:4344671 dosa:Os08t0152400-00 |
| Entrez-Gene | 4344671 |