RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g05810.1 View Network Show in Genome Browser |
| Other Names | Os08g0154225,Os08g0154200 |
| Description | DEAD-box ATP-dependent RNA helicase, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 3113972-3117296 Nucleotide Length: 2844 |
| Protein-coding | LOC_Os08g05810 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| IEA | ||||
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g15700 LOC_Os02g58090 LOC_Os02g14780 LOC_Os03g50850 LOC_Os05g05780 LOC_Os01g49680 LOC_Os01g27040 LOC_Os04g41910 LOC_Os01g15860 LOC_Os05g46560 LOC_Os04g04320 More.. |
| Downstream Genes | LOC_Os10g35550 LOC_Os09g07500 LOC_Os10g25010 LOC_Os08g43640 LOC_Os10g27190 LOC_Os09g37000 LOC_Os11g42420 LOC_Os11g06390 LOC_Os10g36650 LOC_Os11g07500 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2929 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g05810.1 |
| Rice Genome Annotation | LOC_Os08g05810.1 |
| Ricechip | LOC_Os08g05810.1 |
| KEGG | osa:4344682 dosa:Os08t0154225-00dosa:Os08t0154200-01 |