RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g05830.4 View Network Show in Genome Browser |
| Other Names | Os08g0154300 |
| Description | transaldolase, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 3130322-3132240 Nucleotide Length: 615 |
| Protein-coding | LOC_Os08g05830 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g04270 LOC_Os01g70170 LOC_Os03g11540 LOC_Os04g19740 LOC_Os05g51650 LOC_Os06g25439 LOC_Os01g62870 LOC_Os07g44660 LOC_Os06g14510 LOC_Os03g56460 LOC_Os01g62860 More.. |
| Downstream Genes | LOC_Os09g32810 LOC_Os08g43370 LOC_Os12g43664 LOC_Os11g29400 LOC_Os10g11140 LOC_Os08g36320 LOC_Os08g43190 LOC_Os12g07050 LOC_Os09g12290 LOC_Os08g36530 LOC_Os12g08070 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g05830.4 |
| Rice Genome Annotation | LOC_Os08g05830.4 |
| Ricechip | LOC_Os08g05830.4 |
| KEGG | osa:4344683 dosa:Os08t0154300-01 |
| Entrez-Gene | 4344683 |