RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g05910.2 View Network Show in Genome Browser |
| Other Names | Os08g0155400 |
| Description | peptide transporter PTR2, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 3182334-3190438 Nucleotide Length: 1362 |
| Protein-coding | LOC_Os08g05910 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g56110 LOC_Os07g42280 LOC_Os03g29350 LOC_Os03g56140 LOC_Os07g03770 LOC_Os03g45170 LOC_Os04g01590 LOC_Os03g41390 LOC_Os01g45439 LOC_Os03g51690 LOC_Os03g55540 More.. |
| Downstream Genes | LOC_Os12g39400 LOC_Os10g30090 LOC_Os12g42850 LOC_Os09g39500 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g05910.2 |
| Rice Genome Annotation | LOC_Os08g05910.2 |
| Ricechip | LOC_Os08g05910.2 |
| KEGG | osa:4344690 dosa:Os08t0155400-01 |
| Entrez-Gene | 4344690 |