RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g06100.1 View Network Show in Genome Browser |
| Other Names | Os08g0157500 |
| Description | O-methyltransferase, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 3337751-3340959 Nucleotide Length: 1107 |
| Protein-coding | LOC_Os08g06100 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0019748 | secondary metabolic process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g46820 LOC_Os04g46810 LOC_Os02g41650 LOC_Os02g41630 LOC_Os04g01140 LOC_Os02g44310 LOC_Os07g07709 LOC_Os03g58050 LOC_Os02g39330 |
| Downstream Genes | LOC_Os10g16974 LOC_Os08g43050 LOC_Os08g17320 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00944 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g06100.1 |
| Rice Genome Annotation | LOC_Os08g06100.1 |
| Ricechip | LOC_Os08g06100.1 |
| KEGG | osa:4344702 dosa:Os08t0157500-01 |
| Entrez-Gene | 4344702 |