RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g06170.1 View Network Show in Genome Browser |
| Other Names | Os08g0158200 |
| Description | berberine and berberine like domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 3408276-3409968 Nucleotide Length: 1590 |
| Protein-coding | LOC_Os08g06170 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g51170 LOC_Os01g21320 LOC_Os03g41438 LOC_Os05g25450 LOC_Os02g07750 LOC_Os02g39160 |
| Downstream Genes | LOC_Os08g31410 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g06170.1 |
| Rice Genome Annotation | LOC_Os08g06170.1 |
| Ricechip | LOC_Os08g06170.1 |
| KEGG | osa:4344706 dosa:Os08t0158200-02 |
| Entrez-Gene | 4344706 |