RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g06200.1 View Network Show in Genome Browser |
| Other Names | Os08g0158500 |
| Description | stomatin-like protein 2, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 3420569-3424752 Nucleotide Length: 1134 |
| Protein-coding | LOC_Os08g06200 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g30790 LOC_Os03g62490 LOC_Os07g25420 LOC_Os02g37000 LOC_Os04g38900 LOC_Os02g07490 LOC_Os02g14929 LOC_Os02g58460 LOC_Os03g19530 LOC_Os08g05530 LOC_Os05g47446 More.. |
| Downstream Genes | LOC_Os11g40140 LOC_Os11g26850 LOC_Os09g07900 LOC_Os09g12560 LOC_Os10g38660 LOC_Os12g32240 LOC_Os11g11390 LOC_Os10g38670 LOC_Os10g34540 LOC_Os08g45040 LOC_Os10g35560 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g06200.1 |
| Rice Genome Annotation | LOC_Os08g06200.1 |
| Ricechip | LOC_Os08g06200.1 |
| KEGG | osa:4344707 dosa:Os08t0158500-02 |
| Entrez-Gene | 4344707 |